Package: ATQ 0.2.3
ATQ: Alert Time Quality - Evaluating Timely Epidemic Metrics
Provides tools for evaluating timely epidemic detection models within school absenteeism-based surveillance systems. Introduces the concept of alert time quality as an evaluation metric. Includes functions to simulate populations, epidemics, and alert metrics associated with epidemic spread using population census data. The methods are based on research published in Vanderkruk et al. (2023) <doi:10.1186/s12889-023-15747-z> and Ward et al. (2019) <doi:10.1186/s12889-019-7521-7>.
Authors:
ATQ_0.2.3.tar.gz
ATQ_0.2.3.zip(r-4.5)ATQ_0.2.3.zip(r-4.4)ATQ_0.2.3.zip(r-4.3)
ATQ_0.2.3.tgz(r-4.4-any)ATQ_0.2.3.tgz(r-4.3-any)
ATQ_0.2.3.tar.gz(r-4.5-noble)ATQ_0.2.3.tar.gz(r-4.4-noble)
ATQ_0.2.3.tgz(r-4.4-emscripten)ATQ_0.2.3.tgz(r-4.3-emscripten)
ATQ.pdf |ATQ.html✨
ATQ/json (API)
NEWS
| # Install 'ATQ' in R: |
| install.packages('ATQ', repos = c('https://vjoshy.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/vjoshy/atq_surveillance_package/issues
Last updated 3 months agofrom:a68e218842. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 16 2024 |
| R-4.5-win | OK | Nov 16 2024 |
| R-4.5-linux | OK | Nov 16 2024 |
| R-4.4-win | OK | Nov 16 2024 |
| R-4.4-mac | OK | Nov 16 2024 |
| R-4.3-win | OK | Nov 16 2024 |
| R-4.3-mac | OK | Nov 16 2024 |
Exports:alarm_metricsalarm_plot_databest_modelcatchment_simcompile_epicreate_alarm_metrics_summaryelementary_popeval_metricsplot_single_epidemicsimulate_householdsssirsubpop_childrensubpop_noChildren
Dependencies:clicolorspacedplyrfansifarvergenericsggplot2gluegridExtragtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigpurrrR6RColorBrewerrlangscalestibbletidyselectutf8vctrsviridisLitewithrzoo
